Abrogate
Locally BLAST this genome
| Detailed Information for Phage Abrogate |
| Discovery Information |
| Found by |
Kayla Reed |
| Found in |
River Falls, WI USA |
| Finding Institution |
University of Wisconsin-River Falls |
| Year Found |
2011 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
44.853317 N, 92.616408 W Map |
| Discovery Notes |
Soil: Dry, dark, found under a tree away from sidewalks or traffic, had no water near by
Temp: 69 degrees and sunny
Depth: 23mm |
| Plaque Notes |
Has multiple morphologies that are dependent of the temperature of its environment.
Has regular halos, starbursts, comets, and lytic plaques.
The diameter ranges from 2-6mm |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Feb 2, 2012 |
| Sequencing Facility |
VCU |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
52530 |
| GC Content |
63.8% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGATGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A1 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
No |
| Has been Annotated? |
No |
| Is live and searchable in GenBank? |
Not yet |
| Available Multimedia |
| Plaque Picture |
Download |
| Restriction Digest Picture |
Download |
| EM Picture |
Download |
| Archiving Info |
| SEA Designator |
2011UWRFabrogateKLR |
