Airmid
Locally BLAST this genome
| Detailed Information for Phage Airmid |
| Discovery Information |
| Found by |
Jessica De La Luz and Oscar Garcia |
| Found in |
El Paso, TX USA |
| Finding Institution |
University of Texas at El Paso |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
31.869302 N, 106.610061 W Map |
| Discovery Notes |
Gathered soil from small green shrubs lining the banks of an irrigation canal. The soil was moist and collected 6 inches from the surface. The surrounding environment was mildly humid. |
| Plaque Notes |
Average head size: 60.388nm
Average tail size: 143.16 |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Jan 31, 2011 |
| Sequencing Facility |
VCU |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
51241 |
| GC Content |
60.0% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGGAGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A5 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
88 |
| Number of tRNAs |
1
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JN083853 |
| Available Multimedia |
| Plaque Picture |
Download |
| DNAMaster File |
Download |
| Archiving Info |
| SEA Designator |
2010UTEPairmidOGJD |
