Cuco
Locally BLAST this genome
| Detailed Information for Phage Cuco |
| Discovery Information |
| Found by |
Valerie M. Nazario-Acevedo |
| Found in |
Gurabo, PR USA |
| Finding Institution |
University of Puerto Rico at Cayey |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
18.247547 N, 65.972069 W Map |
| Discovery Notes |
Horse Pasture, Humid Soil, 1/8 Inch Deep |
| Plaque Notes |
5 mm, Clear Plaques |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Mar 1, 2011 |
| Sequencing Facility |
DHMRI |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
50965 |
| GC Content |
60.9% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGGAGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A5 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
82 |
| Number of tRNAs |
1
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JN408459 |
| Available Multimedia |
| Plaque Picture |
Download |
| Restriction Digest Picture |
Download |
| EM Picture |
Download |
| DNAMaster File |
Download |
| Archiving Info |
| SEA Designator |
2010UPRCCucoVMNA |
| SEA Lysate Titer |
8.0e9 |
| Date of SEA Lysate Titering |
Oct 18, 2010 |
