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D29

Locally BLAST this genome
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Detailed Information for Phage D29
Discovery Information
Found by S. Froman
Found in CA USA
Finding Institution University of Pittsburgh
Year Found 1954
From enriched soil sample? Unknown
Program Pitt Undergraduate Phagehunters
Sequencing Information
Sequencing Complete? Yes
Shotgun Sequencing Method Sanger Only
Genome length (bp) 49136
GC Content 63.5%
Character of genome ends Defined physical ends
3' Overhang Length 9 bp
Fasta file available? Yes: Download fasta file
Characterization
Cluster A
Other Cluster Members

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Abrogate (A1)

Aeneas (A1)

Anglerfish (A1)

Bethlehem (A1)

BillKnuckles (A1)

Bob3 (A1)

BPBiebs31 (A1)

Bruns (A1)

BuckeyeNut (A1)

Bxb1 (A1)

ConceptII (A1)

DD5 (A1)

Doom (A1)

Dreamboat (A1)

Euphoria (A1)

Fascinus (A1)

FlowerChild (A1)

Fushigi (A1)

Jasper (A1)

JC27 (A1)

KatAttack (A1)

KBG (A1)

KSSJEB (A1)

Kugel (A1)

Lesedi (A1)

Lockley (A1)

Magnito (A1)

Manatee (A1)

Marcell (A1)

Minion (A1)

MPlant7149 (A1)

MrGordo (A1)

Museum (A1)

Nepal (A1)

Pari (A1)

PattyP (A1)

Perseus (A1)

RidgeCB (A1)

SkiPole (A1)

Solon (A1)

Spite (A1)

Switzer (A1)

Target (A1)

Trouble (A1)

U2 (A1)

Violet (A1)

Goose (A10)

Severus (A10)

Twister (A10)

Buddy (A2)

Che12 (A2)

D29 (A2)

Epoch (A2)

Goethe (A2)

GridersLegacy (A2)

KingSt (A2)

L5 (A2)

Lincaica11 (A2)

Nemo (A2)

Pukovnik (A2)

RedRock (A2)

Scorpio7 (A2)

Stumpy (A2)

Trixie (A2)

Turbido (A2)

Tyrone (A2)

Bxz2 (A3)

Dumpling (A3)

FloMo (A3)

HelDan (A3)

JHC117 (A3)

Jobu08 (A3)

Methuselah (A3)

Microwolf (A3)

Misomonster (A3)

Norbert (A3)

Rockstar (A3)

Vix (A3)

Wonder (A3)

Arturo (A4)

Backyardigan (A4)

Dhanush (A4)

Eagle (A4)

Flapjack (A4)

Flux (A4)

ICleared (A4)

LHTSCC (A4)

Maverick (A4)

MeeZee (A4)

Mundrea (A4)

Peaches (A4)

Sabertooth (A4)

Shaka (A4)

TiroTheta9 (A4)

TygerBlood (A4)

Wile (A4)

Wizard007 (A4)

Airmid (A5)

Benedict (A5)

Chadwick (A5)

Cuco (A5)

ElTiger69 (A5)

George (A5)

LittleCherry (A5)

Theia (A5)

Tiger (A5)

Blue7 (A6)

DaVinci (A6)

EricB (A6)

Gladiator (A6)

Hammer (A6)

Jeffabunny (A6)

HINdeR (A7)

Timshel (A7)

Astro (A8)

Saintus (A8)

Smeadley (A8)

Alma (A9)

PackMan (A9)

Afua (Unknown)

BaxterTD (Unknown)

Brooklyn (Unknown)

Butters (Unknown)

HerbSipe (Unknown)

Loser (Unknown)

Nakoi (Unknown)

Norris007 (Unknown)

Ousia (Unknown)

Oxente (Unknown)

Pbnep65 (Unknown)

PhrostyMug (Unknown)

Sabinator (Unknown)

SargentsShorty (Unknown)

Scooter (Unknown)

Skpmule (Unknown)

SmallSoldier (Unknown)

Spheric (Unknown)

Star (Unknown)

Uffda (Unknown)

Zeeba (Unknown)

Subcluster A2
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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D29_1
(predicted 30.3 kD protein)

D29_2
(predicted 28.8 kD protein)

D29_3
(predicted 9.0 kD protein)

D29_4
(predicted 11.1 kD protein)

D29_5
(predicted 17.1 kD protein)

D29_6
(predicted 34.8 kD protein; gp6)

D29_10
(predicted 54.8 kD protein)

D29_11
(predicted 14.6 kD protein)

D29_12
(predicted 28.5 kD protein)

D29_13
(predicted 66.4 kD protein)

D29_14
(predicted 53.5 kD protein)

D29_15
(predicted 31.2 kD protein)

D29_16
(predicted 19.8 kD protein; gp16)

D29_17
(predicted molecular weight 33.9 kD, observed molecular weight greater than 150 kD; gp17)

D29_18
(predicted 5.7 kD protein)

D29_19
(predicted 14.1 kD protein)

D29_19.1
(predicted 7.1 kD protein)

D29_20
(predicted 13.8 kD protein)

D29_21
(predicted 12.2 kD protein)

D29_22
(predicted 15.4 kD protein)

D29_23
(predicted molecular weight 21.3 kD protein, observed 25.0 kD; gp23)

D29_24
(predicted 15.2 kD protein)

D29_25
(predicted 11.4 kD protein; may be synthesized along with gp24 via a programmed translational frameshift)

D29_26
(predicted 86.7 kD protein; putative tape-measure protein; gp26)

D29_27
(predicted 38.7 kD protein; gp27)

D29_28
(predicted 67.1 kD protein; gp28)

D29_29
(predicted 17.0 kD protein)

D29_30
(predicted 10.4 kD protein)

D29_31
(predicted 65.6 kD protein)

D29_32
(predicted 21.8 kD protein)

D29_32.1
(predicted 7.6 kD protein)

D29_33
(predicted 40.0 kD protein; gp33)

D29_34.1
(predicted 15.0 kD protein; possible excisionase function)

D29_36
(predicted 6.3 kD protein)

D29_36.1
(predicted 13.5 kD protein; gp36.1)

D29_38
(predicted 4.9 kD protein)

D29_39
(predicted 14.8 kD protein)

D29_41
(predicted 11.1 kD protein)

D29_41.1
(predicted 7.6 kD protein)

D29_42
(predicted 7.4 kD protein)

D29_43.1
(predicted 5.4 kD protein)

D29_44
(predicted 68.2 kD protein; gp44)

D29_44.1
(predicted 12.2 kD protein)

D29_46
(predicted 15.3 kD protein)

D29_48
(predicted 26.5 kD protein)

D29_49
(predicted 20.3 kD protein)

D29_50
(predicted 77.2 kD protein; gp50)

D29_51
(predicted 7.3 kD protein)

D29_52
(predicted 7.1 kD protein)

D29_53
(predicted 26.3 kD protein)

D29_53.1
(predicted 6.0 kD protein)

D29_54
(predicted 28.5 kD protein)

D29_55
(predicted 17.3 kD protein)

D29_56
(predicted 10.2 kD protein)

D29_57
(predicted 17.2 kD protein)

D29_58
(predicted 14.1 kD protein; gp58)

D29_59
(predicted 17.6 kD protein; T4 exonuclease VII similarity)

D29_59.1
(predicted 5.0 kD protein)

D29_59.2
(predicted 29.8 kD protein; gp59.2)

D29_61
(predicted 14.0 kD protein)

D29_62
(predicted 5.8 kD protein)

D29_63
(predicted 8.9 kD protein)

D29_64
(predicted 14.0 kD protein)

D29_65
(predicted 25.1 kD protein)

D29_66
(predicted 23.0 kD protein)

D29_66.1
(predicted 5.2 kD protein)

D29_68
(predicted 8.7 kD protein)

D29_68.1
(predicted 9.4 kD protein)

D29_69
(predicted 30.7 kD protein)

D29_70
(predicted 15.7 kD protein)

D29_82.1
(predicted 5.1 kD protein)

D29_82.2
(predicted 3.6 kD protein)

D29_84
(predicted 6.9 kD protein)

D29_86
(predicted 10.1 kD protein)

D29_87
(predicted 6.2 kD protein)

D29_88
(predicted 26.5 kD protein)

D29_89
(predicted 11.6 kD protein)

Number of Genes 77
Number of tRNAs 5
Number of tmRNAs 0
Is live and searchable in GenBank? Yes: AF022214
Available Multimedia
Plaque Picture Download
Virtual Digest Picture Download
EM Picture Download
Archiving Info
Pitt Lysate Inventory Numbers 0024, 0025, 0648