Euphoria
Locally BLAST this genome
| Detailed Information for Phage Euphoria |
| Discovery Information |
| Found by |
Lauren Kraft |
| Found in |
Bethlehem, PA USA |
| Finding Institution |
Lehigh University |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
40.661219 N, 75.261047 W Map |
| Discovery Notes |
Sample Collected by Christina Godfried Sie. The sample was found on the bottom of a cold method compost pile near the edge. The soil was moist, dark and at 60°F.
Euphoria's genome was the 200th mycobacteriophage genome sequenced and finished! |
| Plaque Notes |
Plaques had an average diameter of 5-6mm. The appeared like a bulls eye (cloudy and clear regions). They appeared this way after 24 hours. |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Mar 3, 2011 |
| Sequencing Facility |
DHMRI |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
53597 |
| GC Content |
63.7% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGATGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A1 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
94 |
| Number of tRNAs |
0
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JN153086 |
| Available Multimedia |
| Plaque Picture |
Download |
| EM Picture |
Download |
| Archiving Info |
| SEA Designator |
2010LEHIEuphoriaLK |
