HelDan
Locally BLAST this genome
| Detailed Information for Phage HelDan |
| Discovery Information |
| Found by |
Helena Olivieri |
| Found in |
Los Angeles, CA USA |
| Finding Institution |
Loyola Marymount University |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
33 N, 118 W Map |
| Discovery Notes |
very moist soil, surrounded by vegetation |
| Plaque Notes |
Plaques consistently round and turbid; however, sizes of plaques throughout dilutions consistently differed with about an even distribution in sizes between 1mm and 5mm. Samples were incubated for about 24-48 hours at 35°C. |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Apr 7, 2011 |
| Sequencing Facility |
VCU |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
50364 |
| GC Content |
64.0% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGCCGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A3 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
86 |
| Number of tRNAs |
1
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JF957058 |
| Available Multimedia |
| Plaque Picture |
Download |
| EM Picture |
Download |
| DNAMaster File |
Download |
| Archiving Info |
| SEA Designator |
2010LOMAheldanHO |
