Mycobacteriophage Database | Detail for Phage JC27

JC27

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Detailed Information for Phage JC27
Discovery Information
Found by	L. McDowell
Found in	Pittsburgh , PA USA
Finding Institution	University of Pittsburgh
Year Found	2004
From enriched soil sample?	Unknown
Program	Pitt Undergraduate Phagehunters
Sequencing Information
Sequencing Complete?	Yes
Sequencing Facility	Pitt-PBI
Shotgun Sequencing Method	Sanger Only
Genome length (bp)	52169
GC Content	63.6%
Character of genome ends	Defined physical ends
3' Overhang Length	10 bp
3' Overhang Sequence	CGGATGGTAA
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	A
Other Cluster Members	Click to View Abrogate (A1) Aeneas (A1) Anglerfish (A1) Bethlehem (A1) BillKnuckles (A1) Bob3 (A1) BPBiebs31 (A1) Bruns (A1) BuckeyeNut (A1) Bxb1 (A1) ConceptII (A1) DD5 (A1) Doom (A1) Dreamboat (A1) Euphoria (A1) Fascinus (A1) FlowerChild (A1) Fushigi (A1) Jasper (A1) JC27 (A1) KatAttack (A1) KBG (A1) KSSJEB (A1) Kugel (A1) Lesedi (A1) Lockley (A1) Magnito (A1) Manatee (A1) Marcell (A1) Minion (A1) MPlant7149 (A1) MrGordo (A1) Museum (A1) Nepal (A1) Pari (A1) PattyP (A1) Perseus (A1) RidgeCB (A1) SkiPole (A1) Solon (A1) Spite (A1) Switzer (A1) Target (A1) Trouble (A1) U2 (A1) Violet (A1) Goose (A10) Severus (A10) Twister (A10) Buddy (A2) Che12 (A2) D29 (A2) Epoch (A2) Goethe (A2) GridersLegacy (A2) KingSt (A2) L5 (A2) Lincaica11 (A2) Nemo (A2) Pukovnik (A2) RedRock (A2) Scorpio7 (A2) Stumpy (A2) Trixie (A2) Turbido (A2) Tyrone (A2) Bxz2 (A3) Dumpling (A3) FloMo (A3) HelDan (A3) JHC117 (A3) Jobu08 (A3) Methuselah (A3) Microwolf (A3) Misomonster (A3) Norbert (A3) Rockstar (A3) Vix (A3) Wonder (A3) Arturo (A4) Backyardigan (A4) Dhanush (A4) Eagle (A4) Flapjack (A4) Flux (A4) ICleared (A4) LHTSCC (A4) Maverick (A4) MeeZee (A4) Mundrea (A4) Peaches (A4) Sabertooth (A4) Shaka (A4) TiroTheta9 (A4) TygerBlood (A4) Wile (A4) Wizard007 (A4) Airmid (A5) Benedict (A5) Chadwick (A5) Cuco (A5) ElTiger69 (A5) George (A5) LittleCherry (A5) Theia (A5) Tiger (A5) Blue7 (A6) DaVinci (A6) EricB (A6) Gladiator (A6) Hammer (A6) Jeffabunny (A6) HINdeR (A7) Timshel (A7) Astro (A8) Saintus (A8) Smeadley (A8) Alma (A9) PackMan (A9) Afua (Unknown) BaxterTD (Unknown) Brooklyn (Unknown) Butters (Unknown) HerbSipe (Unknown) Loser (Unknown) Nakoi (Unknown) Norris007 (Unknown) Ousia (Unknown) Oxente (Unknown) Pbnep65 (Unknown) PhrostyMug (Unknown) Sabinator (Unknown) SargentsShorty (Unknown) Scooter (Unknown) Skpmule (Unknown) SmallSoldier (Unknown) Spheric (Unknown) Star (Unknown) Uffda (Unknown) Zeeba (Unknown)
Subcluster	A1
Morphotype	Siphoviridae
Has been Phamerated?	Yes
Has been Annotated?	Yes
Gene List	Click to View JC27_gp1 (Original GeneMark call @bp 599) JC27_gp2 (Original GeneMark call @bp 748) JC27_gp3 (Original GeneMark call @bp 1139) JC27_gp4 (Original GeneMark call @bp 1631) JC27_gp5 (Original GeneMark call @bp 2189) JC27_gp6 (Original GeneMark call @bp 2704) JC27_gp7 (Original GeneMark call @bp 3793; Glimmer calls start at 3784) JC27_gp8 (Original GeneMark call @bp 4499) JC27_gp9 (Original GeneMark call @bp 4767) JC27_gp10 (Original GeneMark call @bp 5024) JC27_gp11 (Original GeneMark call @bp 6451) JC27_gp12 (Original GeneMark call @bp 6644; Glimmer calls start at 6698) JC27_gp13 (Original GeneMark call @bp 7632) JC27_gp14 (Original GeneMark call @bp 9317) JC27_gp15 (Original GeneMark call @bp 10756) JC27_gp16 (Original GeneMark call @bp 11696) JC27_gp17 (Original GeneMark call @bp 12218) JC27_gp18 (Original GeneMark call @bp 13304) JC27_gp19 (Original GeneMark call @bp 13822) JC27_gp20 (Original GeneMark call @bp 14271) JC27_gp21 (Original GeneMark call @bp 14633) JC27_gp22 (Original GeneMark call @bp 15032) JC27_gp23 (Original GeneMark call @bp 15487) JC27_gp24 (Original GeneMark call @bp 16451) JC27_gp25 (Original GeneMark call @bp 16894) JC27_gp26 (Original GeneMark call @bp 17262) JC27_gp27 (Original GeneMark call @bp 19766) JC27_gp28 (Original GeneMark call @bp 21820) JC27_gp29 (Original GeneMark call @bp 22002) JC27_gp30 (Original GeneMark call @bp 23842) JC27_gp31 (Original GeneMark call @bp 24300) JC27_gp32 (Original GeneMark call @bp 24656; Glimmer calls start at 24629) JC27_gp33 (Original GeneMark call @bp 25001) JC27_gp34 (Original GeneMark call @bp 26847) JC27_gp35 (Original GeneMark call @bp 28372) JC27_gp36 (Original GeneMark call @bp 28750) JC27_gp37 (Original GeneMark call @bp 28962) JC27_gp38 (Original GeneMark call @bp 29870; Glimmer calls start at 29789) JC27_gp39 (Original GeneMark call @bp 31765) JC27_gp40 (Original GeneMark call @bp 32151) JC27_gp41 (Original GeneMark call @bp 32318) JC27_gp42 (Original GeneMark call @bp 32401; Glimmer calls start at 32461) JC27_gp43 (Original GeneMark call @bp 32694 not called by Glimmer) JC27_gp45 (Original GeneMark call @bp 33047) JC27_gp46 (Original GeneMark call @bp 34894) JC27_gp47 (Original Glimmer call @bp 35060 has strength 5.19) JC27_gp48 (Original GeneMark call @bp 35287) JC27_gp49 (Original GeneMark call @bp 35809) JC27_gp50 (Original GeneMark call @bp 36173) JC27_gp51 (Original GeneMark call @bp 36348) JC27_gp52 (Original GeneMark call @bp 37082; Glimmer calls start at 37136) JC27_gp53 (Original GeneMark call @bp 37269) JC27_gp54 (Original GeneMark call @bp 38036) JC27_gp55 (Original GeneMark call @bp 38212) JC27_gp56 (Original GeneMark call @bp 38691) JC27_gp57 (Original GeneMark call @bp 39014) JC27_gp58 (Original GeneMark call @bp 39535) JC27_gp59 (Original GeneMark call @bp 40039; Glimmer calls start at 40024) JC27_gp60 (Original GeneMark call @bp 40251) JC27_gp61 (Original GeneMark call @bp 40499; Glimmer calls start at 40502) JC27_gp62 (Original GeneMark call @bp 40972) JC27_gp63 (Original GeneMark call @bp 41045 not called by Glimmer) JC27_gp64 (Original GeneMark call @bp 41329) JC27_gp65 (Original GeneMark call @bp 41732) JC27_gp66 (Original GeneMark call @bp 41837 not called by Glimmer) JC27_gp67 (Original GeneMark call @bp 42659) JC27_gp68 (Original GeneMark call @bp 42928) JC27_gp69 (Original GeneMark call @bp 43017 not called by Glimmer) JC27_gp70 (Original GeneMark call @bp 43136) JC27_gp71 (Original GeneMark call @bp 43426) JC27_gp72 (Original GeneMark call @bp 43647) JC27_gp73 (Original GeneMark call @bp 43908) JC27_gp74 (Original GeneMark call @bp 44892) JC27_gp75 (Original GeneMark call @bp 45211) JC27_gp76 (Original GeneMark call @bp 45603) JC27_gp77 (Original GeneMark call @bp 46157) JC27_gp78 (Original GeneMark call @bp 46703) JC27_gp79 (Original GeneMark call @bp 46873) JC27_gp80 (Original GeneMark call @bp 47559) JC27_gp81 (Original GeneMark call @bp 47825) JC27_gp82 (Original GeneMark call @bp 48025) JC27_gp83 (Original GeneMark call @bp 48210) JC27_gp84 (Original GeneMark call @bp 48443) JC27_gp85 (Original GeneMark call @bp 48586) JC27_gp86 (Original GeneMark call @bp 48891) JC27_gp87 (Original GeneMark call @bp 49016) JC27_gp88 (Original GeneMark call @bp 49187) JC27_gp89 (Original GeneMark call @bp 49935; Glimmer calls start at 50010) JC27_gp90 (Original GeneMark call @bp 50162) JC27_gp91 (Original GeneMark call @bp 50293; Glimmer calls start at 50311) JC27_gp92 (Original GeneMark call @bp 50427) JC27_gp93 (Original GeneMark call @bp 50665) JC27_gp94 (Original GeneMark call @bp 51102) JC27_gp95 (Original GeneMark call @bp 51183) JC27_gp96 (Original Glimmer call @bp 51465 has strength 2.73)
Number of Genes	97
Number of tRNAs	0
Number of tmRNAs	0
Is live and searchable in GenBank?	Yes: JF937099
Available Multimedia
Plaque Picture	Download
Virtual Digest Picture	Download
EM Picture	Download
Archiving Info
Pitt Lysate Inventory Numbers	0154, 0186, 0251, 0895

JC27

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