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Kamiyu

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Detailed Information for Phage Kamiyu
Discovery Information
Found by Ching-Chung Ko
Found in State College, PA USA
Finding Institution University of Pittsburgh
Year Found 2009
From enriched soil sample? Yes
Program Pitt Undergraduate Phagehunters
GPS Coordinates 40.800223 N, 77.863144 W Map
Sequencing Information
Sequencing Complete? Yes
Sequencing Facility Pitt-PBI
Shotgun Sequencing Method Sanger and 454
Genome length (bp) 68633
GC Content 67.5%
Character of genome ends Circularly permuted
Fasta file available? Yes: Download fasta file
Characterization
Cluster B
Other Cluster Members
Subcluster B3
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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Kamiyu_gp1
(Original GeneMark call @bp 64; Glimmer calls start at 73)

Kamiyu_gp2
(Original GeneMark call @bp 690)

Kamiyu_gp3
(Original GeneMark call @bp 851)

Kamiyu_gp4
(Original GeneMark call @bp 1072)

Kamiyu_gp5
(Original GeneMark call @bp 2151)

Kamiyu_gp6
(Original GeneMark call @bp 2717)

Kamiyu_gp7
(Original GeneMark call @bp 4866)

Kamiyu_gp8
(Original GeneMark call @bp 5408)

Kamiyu_gp9
(Original GeneMark call @bp 5839)

Kamiyu_gp10
(Original GeneMark call @bp 5944)

Kamiyu_gp11
(Original GeneMark call @bp 6309; Glimmer calls start at 6336)

Kamiyu_gp12
(Original GeneMark call @bp 8203)

Kamiyu_gp13
(Original GeneMark call @bp 10635)

Kamiyu_gp14
(Original GeneMark call @bp 10985)

Kamiyu_gp15
(Original GeneMark call @bp 13111)

Kamiyu_gp16
(Original GeneMark call @bp 13935)

Kamiyu_gp17
(Original GeneMark call @bp 14537; Glimmer calls start at 14657)

Kamiyu_gp18
(Original GeneMark call @bp 14974)

Kamiyu_gp19
(Original GeneMark call @bp 15432)

Kamiyu_gp20
(Original GeneMark call @bp 15908)

Kamiyu_gp21
(Original GeneMark call @bp 16328)

Kamiyu_gp22
(Original GeneMark call @bp 17577 ** not called by Glimmer)

Kamiyu_gp23
(Original GeneMark call @bp 17708; Glimmer calls start at 17615)

Kamiyu_gp24
(Original GeneMark call @bp 18445)

Kamiyu_gp25
(Original GeneMark call @bp 18977)

Kamiyu_gp26
(Original GeneMark call @bp 19332)

Kamiyu_gp27
(Original GeneMark call @bp 19784)

Kamiyu_gp28
(Original GeneMark call @bp 20364)

Kamiyu_gp29
(Original GeneMark call @bp 26115)

Kamiyu_gp30
(Original GeneMark call @bp 27542)

Kamiyu_gp31
(Original GeneMark call @bp 28582)

Kamiyu_gp32
(Original GeneMark call @bp 30809)

Kamiyu_gp33
(Original GeneMark call @bp 32188)

Kamiyu_gp34
(Original GeneMark call @bp 33421 ** not called by Glimmer)

Kamiyu_gp35
(Original GeneMark call @bp 33813)

Kamiyu_gp36
(Original GeneMark call @bp 34249)

Kamiyu_gp37
(Original GeneMark call @bp 34899)

Kamiyu_gp38
(Original GeneMark call @bp 35495)

Kamiyu_gp39
(Original GeneMark call @bp 36867)

Kamiyu_gp40
(Original GeneMark call @bp 37232)

Kamiyu_gp41
(Original GeneMark call @bp 37573)

Kamiyu_gp42
(Original GeneMark call @bp 37983)

Kamiyu_gp43
(Original GeneMark call @bp 39000)

Kamiyu_gp44
(Original GeneMark call @bp 39434)

Kamiyu_gp45
(Original GeneMark call @bp 40177)

Kamiyu_gp46
(Original GeneMark call @bp 40302; Glimmer calls start at 40176)

Kamiyu_gp47
(Original GeneMark call @bp 41505)

Kamiyu_gp48
(Original GeneMark call @bp 43184)

Kamiyu_gp49
(Original GeneMark call @bp 44846; Glimmer calls start at 44855)

Kamiyu_gp50
(Original GeneMark call @bp 45025 ** not called by Glimmer)

Kamiyu_gp51
(Original Glimmer call @bp 45281 has strength 2.34)

Kamiyu_gp52
(Original GeneMark call @bp 45432 ** not called by Glimmer)

Kamiyu_gp53
(Original GeneMark call @bp 47126; Glimmer calls start at 47198)

Kamiyu_gp54
(Original GeneMark call @bp 47575)

Kamiyu_gp55
(Original GeneMark call @bp 47900; Glimmer calls start at 47915)

Kamiyu_gp56
(Original GeneMark call @bp 48385)

Kamiyu_gp57
(Original GeneMark call @bp 51034)

Kamiyu_gp58
(Original GeneMark call @bp 51830)

Kamiyu_gp59
(Original GeneMark call @bp 53644)

Kamiyu_gp60
(Original GeneMark call @bp 53919)

Kamiyu_gp61
(Original GeneMark call @bp 54053)

Kamiyu_gp62
(Original GeneMark call @bp 54496)

Kamiyu_gp63
(Original GeneMark call @bp 54969)

Kamiyu_gp64
(Original GeneMark call @bp 55046; Glimmer calls start at 55088)

Kamiyu_gp65
(Original GeneMark call @bp 55355)

Kamiyu_gp66
(Original GeneMark call @bp 55702)

Kamiyu_gp67
(Original GeneMark call @bp 56048)

Kamiyu_gp68
(Original GeneMark call @bp 56478)

Kamiyu_gp69
(Original GeneMark call @bp 57245)

Kamiyu_gp70
(Original GeneMark call @bp 57490)

Kamiyu_gp71
(Original GeneMark call @bp 57717)

Kamiyu_gp72
(Original GeneMark call @bp 57878)

Kamiyu_gp73
(Original GeneMark call @bp 58500; Glimmer calls start at 58431)

Kamiyu_gp74
(Original GeneMark call @bp 58893)

Kamiyu_gp75
(Original GeneMark call @bp 59297)

Kamiyu_gp76
(Original GeneMark call @bp 59397; Glimmer calls start at 59352)

Kamiyu_gp77
(Original GeneMark call @bp 59515)

Kamiyu_gp78
(Original GeneMark call @bp 59844; Glimmer calls start at 59892)

Kamiyu_gp79
(Original GeneMark call @bp 60572)

Kamiyu_gp80
(Original GeneMark call @bp 60839)

Kamiyu_gp81
(Original GeneMark call @bp 61234)

Kamiyu_gp82
(Original GeneMark call @bp 61325; Glimmer calls start at 61364)

Kamiyu_gp83
(Original GeneMark call @bp 61486)

Kamiyu_gp84
(Original GeneMark call @bp 61641; Glimmer calls start at 61653)

Kamiyu_gp85
(Original GeneMark call @bp 61817; Glimmer calls start at 61808)

Kamiyu_gp86
(Original GeneMark call @bp 62154)

Kamiyu_gp87
(Original GeneMark call @bp 62423; Glimmer calls start at 62486)

Kamiyu_gp88
(Original GeneMark call @bp 62770)

Kamiyu_gp89
(Original GeneMark call @bp 62955)

Kamiyu_gp90
(Original GeneMark call @bp 63213; Glimmer calls start at 63243)

Kamiyu_gp91
(Original GeneMark call @bp 63413)

Kamiyu_gp92
(Original GeneMark call @bp 63836; Glimmer calls start at 63848)

Kamiyu_gp93
(Original GeneMark call @bp 64125)

Kamiyu_gp94
(Original GeneMark call @bp 64505; Glimmer calls start at 64511)

Kamiyu_gp95
(Original Glimmer call @bp 64684 has strength 5.45)

Kamiyu_gp96
(Original GeneMark call @bp 65103; Glimmer calls start at 65148)

Kamiyu_gp97
(Original GeneMark call @bp 65734)

Kamiyu_gp98
(Original GeneMark call @bp 66866)

Kamiyu_gp99
(Original GeneMark call @bp 67230)

Kamiyu_gp100
(Original GeneMark call @bp 67408)

Kamiyu_gp101
(Original GeneMark call @bp 67593)

Kamiyu_gp102
(Original GeneMark call @bp 67835)

Kamiyu_gp103
(Original GeneMark call @bp 68062)

Kamiyu_gp104
(Original GeneMark call @bp 68282)

Number of Genes 103
Number of tRNAs 0
Number of tmRNAs 0
Is live and searchable in GenBank? Yes: JN699018
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