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Lockley

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Detailed Information for Phage Lockley
Discovery Information
Found by Marlana Myers
Found in Pittsburgh , PA USA
Finding Institution Carlow Universtiy
Year Found 2006
From enriched soil sample? Unknown
Program Pitt Undergraduate Phagehunters
Sequencing Information
Sequencing Complete? Yes
Sequencing Facility Pitt-PBI
Shotgun Sequencing Method Sanger Only
Genome length (bp) 51478
GC Content 63.4%
Character of genome ends Defined physical ends
3' Overhang Length 10 bp
Fasta file available? Yes: Download fasta file
Characterization
Cluster A
Other Cluster Members

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Abrogate (A1)

Aeneas (A1)

Anglerfish (A1)

Bethlehem (A1)

BillKnuckles (A1)

Bob3 (A1)

BPBiebs31 (A1)

Bruns (A1)

BuckeyeNut (A1)

Bxb1 (A1)

ConceptII (A1)

DD5 (A1)

Doom (A1)

Dreamboat (A1)

Euphoria (A1)

Fascinus (A1)

FlowerChild (A1)

Fushigi (A1)

Jasper (A1)

JC27 (A1)

KatAttack (A1)

KBG (A1)

KSSJEB (A1)

Kugel (A1)

Lesedi (A1)

Lockley (A1)

Magnito (A1)

Manatee (A1)

Marcell (A1)

Minion (A1)

MPlant7149 (A1)

MrGordo (A1)

Museum (A1)

Nepal (A1)

Pari (A1)

PattyP (A1)

Perseus (A1)

RidgeCB (A1)

SkiPole (A1)

Solon (A1)

Spite (A1)

Switzer (A1)

Target (A1)

Trouble (A1)

U2 (A1)

Violet (A1)

Goose (A10)

Severus (A10)

Twister (A10)

Buddy (A2)

Che12 (A2)

D29 (A2)

Epoch (A2)

Goethe (A2)

GridersLegacy (A2)

KingSt (A2)

L5 (A2)

Lincaica11 (A2)

Nemo (A2)

Pukovnik (A2)

RedRock (A2)

Scorpio7 (A2)

Stumpy (A2)

Trixie (A2)

Turbido (A2)

Tyrone (A2)

Bxz2 (A3)

Dumpling (A3)

FloMo (A3)

HelDan (A3)

JHC117 (A3)

Jobu08 (A3)

Methuselah (A3)

Microwolf (A3)

Misomonster (A3)

Norbert (A3)

Rockstar (A3)

Vix (A3)

Wonder (A3)

Arturo (A4)

Backyardigan (A4)

Dhanush (A4)

Eagle (A4)

Flapjack (A4)

Flux (A4)

ICleared (A4)

LHTSCC (A4)

Maverick (A4)

MeeZee (A4)

Mundrea (A4)

Peaches (A4)

Sabertooth (A4)

Shaka (A4)

TiroTheta9 (A4)

TygerBlood (A4)

Wile (A4)

Wizard007 (A4)

Airmid (A5)

Benedict (A5)

Chadwick (A5)

Cuco (A5)

ElTiger69 (A5)

George (A5)

LittleCherry (A5)

Theia (A5)

Tiger (A5)

Blue7 (A6)

DaVinci (A6)

EricB (A6)

Gladiator (A6)

Hammer (A6)

Jeffabunny (A6)

HINdeR (A7)

Timshel (A7)

Astro (A8)

Saintus (A8)

Smeadley (A8)

Alma (A9)

PackMan (A9)

Afua (Unknown)

BaxterTD (Unknown)

Brooklyn (Unknown)

Butters (Unknown)

HerbSipe (Unknown)

Loser (Unknown)

Nakoi (Unknown)

Norris007 (Unknown)

Ousia (Unknown)

Oxente (Unknown)

Pbnep65 (Unknown)

PhrostyMug (Unknown)

Sabinator (Unknown)

SargentsShorty (Unknown)

Scooter (Unknown)

Skpmule (Unknown)

SmallSoldier (Unknown)

Spheric (Unknown)

Star (Unknown)

Uffda (Unknown)

Zeeba (Unknown)

Subcluster A1
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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Lockley_1

Lockley_2
(WhiB/HNH endo)

Lockley_3

Lockley_4

Lockley_5
(tail fiber-like protein)

Lockley_6

Lockley_7

Lockley_8

Lockley_9
(lysin A)

Lockley_10
(lysin B)

Lockley_11
(terminase large subunit)

Lockley_12
(portal)

Lockley_13
(putative head assembly protein)

Lockley_14
(scaffold)

Lockley_15
(capsid)

Lockley_16

Lockley_17

Lockley_18

Lockley_19

Lockley_20

Lockley_21
(major tail protein)

Lockley_22
(tail scaffold protein)

Lockley_23
(tail scaffold protein; +1 programmed frameshift)

Lockley_24
(tapemeasure protein)

Lockley_25
(minor tail protein)

Lockley_26

Lockley_27
(minor tail protein)

Lockley_28

Lockley_29

Lockley_30

Lockley_31

Lockley_32

Lockley_33
(putative tail protein)

Lockley_34

Lockley_35

Lockley_36

Lockley_37

Lockley_38
(serine integrase)

Lockley_39

Lockley_40

Lockley_41

Lockley_42

Lockley_43

Lockley_44
(DNA polymerase I)

Lockley_45

Lockley_46

Lockley_47

Lockley_48

Lockley_49

Lockley_50
(recombination directionality factor; NrdC)

Lockley_51

Lockley_52

Lockley_53
(DNA topoisomerase-primase)

Lockley_54
(DNA primase)

Lockley_55

Lockley_56

Lockley_57
(endo VII)

Lockley_58

Lockley_59
(glutaredoxin)

Lockley_60
(DnaB-like helicase)

Lockley_61

Lockley_62

Lockley_63

Lockley_64

Lockley_65

Lockley_66

Lockley_67

Lockley_68
(putative RecB)

Lockley_69

Lockley_70

Lockley_71

Lockley_72
(repressor)

Lockley_73

Lockley_74

Lockley_75

Lockley_76

Lockley_77

Lockley_78

Lockley_79

Lockley_80

Lockley_81

Lockley_82

Lockley_83

Lockley_84

Lockley_85

Lockley_86

Lockley_87
(DNA methylase)

Lockley_88

Lockley_89

Lockley_90

Number of Genes 90
Number of tRNAs 0
Number of tmRNAs 0
Is live and searchable in GenBank? Yes: EU744249
Available Multimedia
Plaque Picture Download
Virtual Digest Picture Download
EM Picture Download
Archiving Info
Pitt Lysate Inventory Number 0216