PattyP
Locally BLAST this genome
| Detailed Information for Phage PattyP |
| Discovery Information |
| Found by |
Brandon Krause |
| Found in |
Kenosha, WI USA |
| Finding Institution |
Carthage College |
| Year Found |
2011 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
42.620083 N, 87.819883 W Map |
| Discovery Notes |
Water sample from Lake Michigan, about 6 inches below surface. The water was about 23 degrees Celsius. The beach was rocky. |
| Plaque Notes |
Plaques are fairly large, turbid, and they have a bull's eye. There is no variation in plaque morphology. |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Jan 9, 2012 |
| Sequencing Facility |
VCU |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
52057 |
| GC Content |
63.6% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGATGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A1 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
No |
| Has been Annotated? |
No |
| Is live and searchable in GenBank? |
Not yet |
| Available Multimedia |
| EM Picture |
Download |
| Archiving Info |
| SEA Designator |
2011CARTpattypBK |
| SEA Lysate Titer |
3.3e10 |
| Date of SEA Lysate Titering |
Nov 11, 2011 |
