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Pixie

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Detailed Information for Phage Pixie
Discovery Information
Found by Christina Ferreira
Found in Houston (Harris County), TX USA
Finding Institution University of Pittsburgh
Year Found 2008
From enriched soil sample? Unknown
Program Pitt Undergraduate Phagehunters
Sequencing Information
Sequencing Complete? Yes
Sequencing Facility Pitt-PBI
Shotgun Sequencing Method 454 Only
Genome length (bp) 61147
GC Content 67.3%
Character of genome ends Defined physical ends
3' Overhang Length 11 bp
3' Overhang Sequence CTCGATGGCAT
Fasta file available? Yes: Download fasta file
Characterization
Cluster K
Other Cluster Members
Subcluster K3
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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Pixie_gp1
(Original GeneMark call @bp 3; Glimmer calls start at 51)

Pixie_gp2
(Original GeneMark call @bp 191)

Pixie_gp3
(Original GeneMark call @bp 412)

Pixie_gp4
(Original GeneMark call @bp 576)

Pixie_gp5
(Original GeneMark call @bp 834)

Pixie_gp6
(Original GeneMark call @bp 1028)

Pixie_gp7
(Original GeneMark call @bp 1239)

Pixie_gp8
(Original GeneMark call @bp 2674)

Pixie_gp9
(Original GeneMark call @bp 4178; Glimmer calls start at 4265)

Pixie_gp10
(Original GeneMark call @bp 6880; Glimmer calls start at 6766)

Pixie_gp11
(Original GeneMark call @bp 7078)

Pixie_gp12
(Original GeneMark call @bp 7697)

Pixie_gp13
(Original GeneMark call @bp 8739)

Pixie_gp14
(Original GeneMark call @bp 9122)

Pixie_gp15
(Original GeneMark call @bp 9456)

Pixie_gp16
(Original GeneMark call @bp 9737)

Pixie_gp17
(Original GeneMark call @bp 10319)

Pixie_gp18
(Original GeneMark call @bp 11101)

Pixie_gp19
(Original GeneMark call @bp 11655)

Pixie_gp20
(Original GeneMark call @bp 11949)

Pixie_gp21
(Original GeneMark call @bp 16222)

Pixie_gp22
(Original GeneMark call @bp 17358)

Pixie_gp23
(Original GeneMark call @bp 19121)

Pixie_gp24
(Original GeneMark call @bp 19682)

Pixie_gp25
(Original GeneMark call @bp 20785)

Pixie_gp26
(Original GeneMark call @bp 21086)

Pixie_gp27
(Original GeneMark call @bp 23437)

Pixie_gp28
(Original GeneMark call @bp 23724)

Pixie_gp29
(Original GeneMark call @bp 24881)

Pixie_gp30
(Original GeneMark call @bp 25256)

Pixie_gp31
(Original GeneMark call @bp 26938)

Pixie_gp32
(Original GeneMark call @bp 27737; Glimmer calls start at 27704)

Pixie_gp33
(Original GeneMark call @bp 28180)

Pixie_gp34
(Original GeneMark call @bp 28524)

Pixie_gp35
(Original GeneMark call @bp 28762)

Pixie_gp36
(Original GeneMark call @bp 29889)

Pixie_gp37
(Original GeneMark call @bp 30167)

Pixie_gp38
(Original GeneMark call @bp 30537)

Pixie_gp39
(Original GeneMark call @bp 30929)

Pixie_gp40
(Original GeneMark call @bp 31181)

Pixie_gp41
(Original GeneMark call @bp 31717)

Pixie_gp42
(Original GeneMark call @bp 32081)

Pixie_gp43
(Original GeneMark call @bp 33439; Glimmer calls start at 33433)

Pixie_gp44
(Original GeneMark call @bp 34571; Glimmer calls start at 34706)

Pixie_gp45
(Original GeneMark call @bp 35124)

Pixie_gp46
(Original GeneMark call @bp 35491)

Pixie_gp47
(Original GeneMark call @bp 35607)

Pixie_gp48
(Original GeneMark call @bp 35823)

Pixie_gp49
(Original GeneMark call @bp 36282)

Pixie_gp50
(Original GeneMark call @bp 36518)

Pixie_gp51
(Original GeneMark call @bp 36682 ** not called by Glimmer)

Pixie_gp52
(Original GeneMark call @bp 36777)

Pixie_gp53
(Original GeneMark call @bp 37451)

Pixie_gp54
(Original GeneMark call @bp 37750; Glimmer calls start at 37717)

Pixie_gp55
(Original GeneMark call @bp 39065)

Pixie_gp56
(Original GeneMark call @bp 39484)

Pixie_gp57
(Original GeneMark call @bp 39789)

Pixie_gp58
(Original GeneMark call @bp 40343)

Pixie_gp59
(Original GeneMark call @bp 40609)

Pixie_gp60
(Original GeneMark call @bp 40914)

Pixie_gp61
(Original GeneMark call @bp 41834)

Pixie_gp62
(Original GeneMark call @bp 41970)

Pixie_gp63
(Original GeneMark call @bp 42158)

Pixie_gp64
(Original GeneMark call @bp 42642 ** not called by Glimmer)

Pixie_gp65
(Original GeneMark call @bp 42812 ** not called by Glimmer)

Pixie_gp66
(Original GeneMark call @bp 43008)

Pixie_gp67
(Original GeneMark call @bp 43623)

Pixie_gp68
(Original GeneMark call @bp 43865)

Pixie_gp69
(Original GeneMark call @bp 44279)

Pixie_gp70
(Original GeneMark call @bp 47286)

Pixie_gp71
(Original GeneMark call @bp 47965)

Pixie_gp72
(Original GeneMark call @bp 48408)

Pixie_gp73
(Original GeneMark call @bp 48565)

Pixie_gp74
(Original GeneMark call @bp 49525)

Pixie_gp75
(Original GeneMark call @bp 49917)

Pixie_gp76
(Original GeneMark call @bp 50303)

Pixie_gp77
(Original GeneMark call @bp 50595)

Pixie_gp78
(Original GeneMark call @bp 50938)

Pixie_gp79
(Original GeneMark call @bp 51629)

Pixie_gp80
(Original GeneMark call @bp 52122)

Pixie_gp81
(Original GeneMark call @bp 52298)

Pixie_gp82
(Original GeneMark call @bp 53179)

Pixie_gp83
(Original GeneMark call @bp 53658; Glimmer calls start at 53652)

Pixie_gp84
(Original GeneMark call @bp 54122; Glimmer calls start at 54143)

Pixie_gp85
(Original GeneMark call @bp 54434)

Pixie_gp86
(Original GeneMark call @bp 54891)

Pixie_gp87
(Original GeneMark call @bp 55481)

Pixie_gp88
(Original GeneMark call @bp 55789)

Pixie_gp89
(Original GeneMark call @bp 56267)

Pixie_gp90
(Original GeneMark call @bp 56524)

Pixie_gp91
(Original GeneMark call @bp 56768)

Pixie_gp92
(Original GeneMark call @bp 57029)

Pixie_gp93
(Original GeneMark call @bp 57420)

Pixie_gp94
(Original GeneMark call @bp 58224)

Pixie_gp95
(Original GeneMark call @bp 58520)

Pixie_gp96
(Original GeneMark call @bp 58971)

Pixie_gp97
(Original Glimmer call @bp 60795 has strength 8.74)

Pixie_gp98
(Original GeneMark call @bp 60107 ** not called by Glimmer)

Pixie_gp99
(Original GeneMark call @bp 60346 ** not called by Glimmer)

Pixie_gp100
(Original GeneMark call @bp 60794; Glimmer calls start at 60752)

Number of Genes 100
Number of tRNAs 0
Number of tmRNAs 0
Is live and searchable in GenBank? Yes: JF937104
Available Multimedia
Plaque Picture Download
Virtual Digest Picture Download