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Rey

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Detailed Information for Phage Rey
Discovery Information
Found by Christina Ferreira
Found in Houston (Harris County), TX USA
Finding Institution University of Pittsburgh
Year Found 2008
From enriched soil sample? Unknown
Program Pitt Undergraduate Phagehunters
GPS Coordinates 29.725031 N, 95.28519 W Map
Sequencing Information
Sequencing Complete? Yes
Sequencing Facility Pitt-PBI
Shotgun Sequencing Method 454 Only
Genome length (bp) 83724
GC Content 60.9%
Character of genome ends Defined physical ends
3' Overhang Length 11 bp
3' Overhang Sequence ACCCCATGCAA
Fasta file available? Yes: Download fasta file
Characterization
Cluster M
Other Cluster Members

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Subcluster N/A
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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Rey_gp1
(Original GeneMark call @bp 536)

Rey_gp2
(Original GeneMark call @bp 1222)

Rey_gp3
(Original GeneMark call @bp 1903; Glimmer calls start at 1915)

Rey_gp4
(Original GeneMark call @bp 2206)

Rey_gp5
(Original GeneMark call @bp 2370)

Rey_gp6
(Original GeneMark call @bp 2648)

Rey_gp7
(Original GeneMark call @bp 2826; Glimmer calls start at 2865)

Rey_gp8
(Original GeneMark call @bp 3016)

Rey_gp9
(Original GeneMark call @bp 3364)

Rey_gp10
(Original GeneMark call @bp 3630; Glimmer calls start at 3636)

Rey_gp11
(Original GeneMark call @bp 3875)

Rey_gp12
(Original GeneMark call @bp 4066)

Rey_gp13
(Original GeneMark call @bp 4248; Glimmer calls start at 4251)

Rey_gp14
(Original GeneMark call @bp 4475)

Rey_gp15
(Original GeneMark call @bp 4759; Glimmer calls start at 4735)

Rey_gp16
(Original GeneMark call @bp 4856)

Rey_gp17
(Original GeneMark call @bp 5157)

Rey_gp18
(Original GeneMark call @bp 5535)

Rey_gp19
(Original GeneMark call @bp 7070)

Rey_gp20
(Original GeneMark call @bp 8671)

Rey_gp21
(Original GeneMark call @bp 9898)

Rey_gp22
(Original GeneMark call @bp 10623)

Rey_gp23
(Original GeneMark call @bp 11802)

Rey_gp24
(Original GeneMark call @bp 12284)

Rey_gp25
(Original GeneMark call @bp 12642)

Rey_gp26
(Original GeneMark call @bp 13073)

Rey_gp27
(Original GeneMark call @bp 13596)

Rey_gp28
(Original GeneMark call @bp 14582)

Rey_gp29
(Original GeneMark call @bp 15070)

Rey_gp30
(Original GeneMark call @bp 15430)

Rey_gp31
(Original GeneMark call @bp 22233)

Rey_gp32
(Original GeneMark call @bp 23117)

Rey_gp33
(Original GeneMark call @bp 24993; Glimmer calls start at 24936)

Rey_gp34
(Original GeneMark call @bp 25395)

Rey_gp35
(Original GeneMark call @bp 28073)

Rey_gp36
(Original GeneMark call @bp 29170)

Rey_gp37
(Original GeneMark call @bp 29524)

Rey_gp38
(Original GeneMark call @bp 29784)

Rey_gp39
(Original GeneMark call @bp 30124)

Rey_gp40
(Original GeneMark call @bp 31173)

Rey_gp41
(Original GeneMark call @bp 32585)

Rey_gp42
(Original GeneMark call @bp 32773)

Rey_gp43
(Original GeneMark call @bp 33168)

Rey_gp44
(Original GeneMark call @bp 34155)

Rey_gp45
(Original GeneMark call @bp 34620)

Rey_gp46
(Original GeneMark call @bp 34796)

Rey_gp47
(Original GeneMark call @bp 35036)

Rey_gp48
(Original GeneMark call @bp 35434)

Rey_gp49
(Original GeneMark call @bp 36096)

Rey_gp50
(Original GeneMark call @bp 36251)

Rey_gp51
(Original GeneMark call @bp 36466)

Rey_gp52
(Original GeneMark call @bp 36777)

Rey_gp53
(Original GeneMark call @bp 37045)

Rey_gp54
(Original GeneMark call @bp 37371)

Rey_gp55
(Original GeneMark call @bp 38168)

Rey_gp56
(Original GeneMark call @bp 38887)

Rey_gp57
(Original Glimmer call @bp 39575 has strength 3.40)

Rey_gp58
(Original GeneMark call @bp 39459; Glimmer calls start at 39552)

Rey_gp59
(Original GeneMark call @bp 39808)

Rey_gp60
(Original GeneMark call @bp 40108)

Rey_gp61
(Original GeneMark call @bp 40431)

Rey_gp62
(Original GeneMark call @bp 40778)

Rey_gp63
(Original GeneMark call @bp 41518; Glimmer calls start at 41497)

Rey_gp64
(Original GeneMark call @bp 41702)

Rey_gp65
(Original GeneMark call @bp 42601)

Rey_gp66
(Original GeneMark call @bp 42924)

Rey_gp67
(Original GeneMark call @bp 43517)

Rey_gp68
(Original GeneMark call @bp 43903)

Rey_gp69
(Original GeneMark call @bp 44043)

Rey_gp70
(Original GeneMark call @bp 44350)

Rey_gp71
(Original GeneMark call @bp 44666)

Rey_gp72
(Original GeneMark call @bp 45133)

Rey_gp73
(Original Glimmer call @bp 45650 has strength 0.07)

Rey_gp74
(Original GeneMark call @bp 45562; Glimmer calls start at 45706)

Rey_gp75
(Original GeneMark call @bp 45977)

Rey_gp76
(Original GeneMark call @bp 46472; Glimmer calls start at 46508)

Rey_gp77
(Original GeneMark call @bp 47125)

Rey_gp78
(Original GeneMark call @bp 48249)

Rey_gp79
(Original GeneMark call @bp 48401)

Rey_gp80
(Original GeneMark call @bp 48943; Glimmer calls start at 49180)

Rey_gp81
(Original GeneMark call @bp 49341)

Rey_gp82
(Original GeneMark call @bp 50267; Glimmer calls start at 50264)

Rey_gp83
(Original GeneMark call @bp 50484)

Rey_gp84
(Original GeneMark call @bp 50912)

Rey_gp85
(Original GeneMark call @bp 51185)

Rey_gp86
(Original GeneMark call @bp 51775)

Rey_gp87
(Original GeneMark call @bp 51927)

Rey_gp88
(Original GeneMark call @bp 52736)

Rey_gp89
(Original GeneMark call @bp 52972)

Rey_gp90
(Original GeneMark call @bp 53184 ** not called by Glimmer)

Rey_gp91
(Original GeneMark call @bp 53291; Glimmer calls start at 53234)

Rey_gp92
(Original GeneMark call @bp 53383)

Rey_gp93
(Original Glimmer call @bp 53690 has strength 6.18)

Rey_gp94
(Original GeneMark call @bp 53565 ** not called by Glimmer)

Rey_gp95
(Original GeneMark call @bp 53662)

Rey_gp96
(Original GeneMark call @bp 54134)

Rey_gp97
(Original GeneMark call @bp 54261)

Rey_gp98
(Original GeneMark call @bp 54425)

Rey_gp99
(Original GeneMark call @bp 54655; Glimmer calls start at 54667)

Rey_gp100
(Original GeneMark call @bp 54891)

Rey_gp101
(Original GeneMark call @bp 55234)

Rey_gp102
(Original GeneMark call @bp 55524; Glimmer calls start at 55491)

Rey_gp103
(Original GeneMark call @bp 55933; Glimmer calls start at 56086)

Rey_gp104
(Original GeneMark call @bp 56267)

Rey_gp105
(Original GeneMark call @bp 56595)

Rey_gp109
(Original Glimmer call @bp 58276 has strength 3.53)

Rey_gp111
(Original Glimmer call @bp 59016 has strength 0.24)

Rey_gp114
(Original GeneMark call @bp 59617)

Rey_gp117
(Original GeneMark call @bp 60200)

Rey_gp121
(Original GeneMark call @bp 60792; Glimmer calls start at 60756)

Rey_gp131
(Original GeneMark call @bp 62347)

Rey_gp132
(Original GeneMark call @bp 62781; Glimmer calls start at 62835)

Rey_gp133
(Original GeneMark call @bp 62972 ** not called by Glimmer)

Rey_gp134
(Original GeneMark call @bp 63046; Glimmer calls start at 62947)

Rey_gp135
(Original GeneMark call @bp 64261)

Rey_gp136
(Original GeneMark call @bp 64749)

Rey_gp137
(Original GeneMark call @bp 64971)

Rey_gp138
(Original GeneMark call @bp 65174)

Rey_gp139
(Original GeneMark call @bp 65374)

Rey_gp140
(Original GeneMark call @bp 66057)

Rey_gp141
(Original GeneMark call @bp 66287)

Rey_gp142
(Original GeneMark call @bp 66571)

Rey_gp143
(Original GeneMark call @bp 67065)

Rey_gp144
(Original GeneMark call @bp 67232)

Rey_gp145
(Original GeneMark call @bp 67870)

Rey_gp146
(Original GeneMark call @bp 68097)

Rey_gp147
(Original GeneMark call @bp 68338)

Rey_gp148
(Original GeneMark call @bp 70427)

Rey_gp149
(Original GeneMark call @bp 70820)

Rey_gp150
(Original GeneMark call @bp 71017)

Rey_gp151
(Original GeneMark call @bp 71535)

Rey_gp152
(Original GeneMark call @bp 72507)

Rey_gp153
(Original GeneMark call @bp 72809)

Rey_gp154
(Original GeneMark call @bp 73018)

Rey_gp155
(Original GeneMark call @bp 73619; Glimmer calls start at 73640)

Rey_gp156
(Original GeneMark call @bp 74156)

Rey_gp157
(Original GeneMark call @bp 74428)

Rey_gp158
(Original GeneMark call @bp 74898)

Rey_gp159
(Original GeneMark call @bp 75095)

Rey_gp160
(Original GeneMark call @bp 75378)

Rey_gp161
(Original GeneMark call @bp 75634)

Rey_gp162
(Original GeneMark call @bp 75920)

Rey_gp163
(Original GeneMark call @bp 76578)

Rey_gp164
(Original GeneMark call @bp 77747; Glimmer calls start at 77837)

Rey_gp165
(Original GeneMark call @bp 78264)

Rey_gp166
(Original GeneMark call @bp 78620)

Rey_gp167
(Original GeneMark call @bp 78748 ** not called by Glimmer)

Rey_gp168
(Original GeneMark call @bp 79078)

Rey_gp169
(Original GeneMark call @bp 79384)

Rey_gp170
(Original GeneMark call @bp 80167)

Rey_gp171
(Original GeneMark call @bp 80517)

Rey_gp172
(Original GeneMark call @bp 81204)

Rey_gp173
(Original GeneMark call @bp 81447)

Rey_gp174
(Original GeneMark call @bp 81692)

Rey_gp175
(Original GeneMark call @bp 81982)

Number of Genes 153
Number of tRNAs 21
Number of tmRNAs 1
Is live and searchable in GenBank? Yes: JF937105
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