RidgeCB
Locally BLAST this genome
| Detailed Information for Phage RidgeCB |
| Discovery Information |
| Found by |
Ryan C Braunberger |
| Found in |
Fort Benton, MT USA |
| Finding Institution |
University of Montana |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
47.797460 N, 110.593934 W Map |
| Discovery Notes |
From Free Range Chicken Coop. Dark and Dry. Sample from Chicken manure. |
| Plaque Notes |
Large, clear plaques. Very lytic. Incubation times of about 17 hours. |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Mar 3, 2011 |
| Sequencing Facility |
DHMRI |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
50844 |
| GC Content |
64.0% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGATGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A1 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
89 |
| Number of tRNAs |
0
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JN398369 |
| Available Multimedia |
| Plaque Picture |
Download |
| Restriction Digest Picture |
Download |
| EM Picture |
Download |
| Archiving Info |
| SEA Lysate Titer |
2.14e10 |
| Date of SEA Lysate Titering |
Nov 9, 2010 |
