Shauna1
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| Detailed Information for Phage Shauna1 | |
| Discovery Information | |
| Found by | Marshall Sheide |
| Found in | Orem, UT USA |
| Finding Institution | Brigham Young University |
| Year Found | 2010 |
| From enriched soil sample? | Yes |
| Program | SEA Program |
| GPS Coordinates | 40.325986 N, 111.735480 W Map |
| Discovery Notes | It was right next to a strawberry patch on some moist ground. Temperature was about 70 degrees Fahrenheit, and it was found in some rich soil in a green house. |
| Plaque Notes | Plaques are very clear and show up very quickly. the phage has a lytic cycle and will create a web plate withing 24 go 30 hours. there isn't any variation except that the plaques became more and more clear as I purified it. After dilution 3, the morphology has stayed the same each time. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 1, 2011 |
| Sequencing Facility | DHMRI |
| Shotgun Sequencing Method | 454 Only |
| Genome length (bp) | 59315 |
| GC Content | 61.7% |
| Character of genome ends | Defined physical ends |
| 3' Overhang Length | 10 bp |
| 3' Overhang Sequence | CGGTAGGCGC |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | F |
| Other Cluster Members |
Click to ViewArdmore (F1) Bobi (F1) Boomer (F1) Braemar (F1) Cakepop (F1) Che8 (F1) Chikondi (F1) Clover (F1) CoolGuy (F1) Dante (F1) DeadP (F1) DLane (F1) Dorothy (F1) DotProduct (F1) Drago (F1) Fruitloop (F1) Gardregs (F1) Garlic (F1) Ginona (F1) GUmbie (F1) Hades (F1) Hamulus (F1) Hegedechwinu (F1) Ibhubesi (F1) Job42 (F1) Kalikimaka (F1) Krakatau (F1) Libby (F1) Llij (F1) Luigi (F1) Lysinator (F1) Mantra (F1) Mozy (F1) Mutaforma13 (F1) Ogopogo (F1) Pacc40 (F1) PhrankthaTank (F1) Plackberry (F1) PlayDoh (F1) PMC (F1) Prometheus (F1) Ramsey (F1) RockyHorror (F1) Saal (F1) SaltyMike (F1) SG4 (F1) Shauna1 (F1) ShiLan (F1) SiSi (F1) Spartacus (F1) Spoonbill (F1) Taino (F1) Taj (F1) Tweety (F1) Wee (F1) YoungOne (F1) Avani (F2) Che9d (F2) Yoshi (F2) Kishmeesh (Unknown) |
| Subcluster | F1 |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Has been Annotated? | Yes |
| Gene List |
Click to View |
| Number of Genes | 107 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Is live and searchable in GenBank? | Yes: JN020141 |
| Available Multimedia | |
| Plaque Picture | Download |
| EM Picture | Download |
| XML File | Download |
| Archiving Info | |
| SEA Designator | 2010BRYOshauna1MGS |