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Switzer

Locally BLAST this genome
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Detailed Information for Phage Switzer
Discovery Information
Found by N. Jameson
Found in Pittsburgh, PA USA
Finding Institution University of Pittsburgh
Year Found 2005
From enriched soil sample? Unknown
Program Pitt Undergraduate Phagehunters
Sequencing Information
Sequencing Complete? Yes
Sequencing Facility Pitt-PBI
Shotgun Sequencing Method Sanger Only
Genome length (bp) 52298
GC Content 63.8%
Character of genome ends Defined physical ends
3' Overhang Length 10 bp
Fasta file available? Yes: Download fasta file
Characterization
Cluster A
Other Cluster Members

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Abrogate (A1)

Aeneas (A1)

Anglerfish (A1)

Bethlehem (A1)

BillKnuckles (A1)

Bob3 (A1)

BPBiebs31 (A1)

Bruns (A1)

BuckeyeNut (A1)

Bxb1 (A1)

ConceptII (A1)

DD5 (A1)

Doom (A1)

Dreamboat (A1)

Euphoria (A1)

Fascinus (A1)

FlowerChild (A1)

Fushigi (A1)

Jasper (A1)

JC27 (A1)

KatAttack (A1)

KBG (A1)

KSSJEB (A1)

Kugel (A1)

Lesedi (A1)

Lockley (A1)

Magnito (A1)

Manatee (A1)

Marcell (A1)

Minion (A1)

MPlant7149 (A1)

MrGordo (A1)

Museum (A1)

Nepal (A1)

Pari (A1)

PattyP (A1)

Perseus (A1)

RidgeCB (A1)

SkiPole (A1)

Solon (A1)

Spite (A1)

Switzer (A1)

Target (A1)

Trouble (A1)

U2 (A1)

Violet (A1)

Goose (A10)

Severus (A10)

Twister (A10)

Buddy (A2)

Che12 (A2)

D29 (A2)

Epoch (A2)

Goethe (A2)

GridersLegacy (A2)

KingSt (A2)

L5 (A2)

Lincaica11 (A2)

Nemo (A2)

Pukovnik (A2)

RedRock (A2)

Scorpio7 (A2)

Stumpy (A2)

Trixie (A2)

Turbido (A2)

Tyrone (A2)

Bxz2 (A3)

Dumpling (A3)

FloMo (A3)

HelDan (A3)

JHC117 (A3)

Jobu08 (A3)

Methuselah (A3)

Microwolf (A3)

Misomonster (A3)

Norbert (A3)

Rockstar (A3)

Vix (A3)

Wonder (A3)

Arturo (A4)

Backyardigan (A4)

Dhanush (A4)

Eagle (A4)

Flapjack (A4)

Flux (A4)

ICleared (A4)

LHTSCC (A4)

Maverick (A4)

MeeZee (A4)

Mundrea (A4)

Peaches (A4)

Sabertooth (A4)

Shaka (A4)

TiroTheta9 (A4)

TygerBlood (A4)

Wile (A4)

Wizard007 (A4)

Airmid (A5)

Benedict (A5)

Chadwick (A5)

Cuco (A5)

ElTiger69 (A5)

George (A5)

LittleCherry (A5)

Theia (A5)

Tiger (A5)

Blue7 (A6)

DaVinci (A6)

EricB (A6)

Gladiator (A6)

Hammer (A6)

Jeffabunny (A6)

HINdeR (A7)

Timshel (A7)

Astro (A8)

Saintus (A8)

Smeadley (A8)

Alma (A9)

PackMan (A9)

Afua (Unknown)

BaxterTD (Unknown)

Brooklyn (Unknown)

Butters (Unknown)

HerbSipe (Unknown)

Loser (Unknown)

Nakoi (Unknown)

Norris007 (Unknown)

Ousia (Unknown)

Oxente (Unknown)

Pbnep65 (Unknown)

PhrostyMug (Unknown)

Sabinator (Unknown)

SargentsShorty (Unknown)

Scooter (Unknown)

Skpmule (Unknown)

SmallSoldier (Unknown)

Spheric (Unknown)

Star (Unknown)

Uffda (Unknown)

Zeeba (Unknown)

Subcluster A1
Morphotype Siphoviridae
Has been Phamerated? Yes
Has been Annotated? Yes
Gene List

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Switzer_gp1
(Original GeneMark call @bp 598)

Switzer_gp2
(Original GeneMark call @bp 747)

Switzer_gp3
(Original GeneMark call @bp 1078)

Switzer_gp4
(Original GeneMark call @bp 1880)

Switzer_gp5
(Original GeneMark call @bp 2969; Glimmer calls start at 2960)

Switzer_gp6
(Original GeneMark call @bp 3659)

Switzer_gp7
(Original GeneMark call @bp 3927)

Switzer_gp8
(Original GeneMark call @bp 4184; Glimmer calls start at 4232)

Switzer_gp9
(Original GeneMark call @bp 5607; Glimmer calls start at 5661)

Switzer_gp10
(Original GeneMark call @bp 6638; Glimmer calls start at 6599)

Switzer_gp11
(Original GeneMark call @bp 6933)

Switzer_gp12
(Original GeneMark call @bp 8618)

Switzer_gp13
(Original GeneMark call @bp 10057)

Switzer_gp14
(Original GeneMark call @bp 10996)

Switzer_gp15
(Original GeneMark call @bp 11518)

Switzer_gp16
(Original GeneMark call @bp 12610)

Switzer_gp17
(Original GeneMark call @bp 13071)

Switzer_gp18
(Original GeneMark call @bp 13520)

Switzer_gp19
(Original GeneMark call @bp 13882)

Switzer_gp20
(Original GeneMark call @bp 14281)

Switzer_gp21
(Original GeneMark call @bp 14736)

Switzer_gp22
(Original GeneMark call @bp 15693)

Switzer_gp23
(Original GeneMark call @bp 16121)

Switzer_gp24
(Original GeneMark call @bp 16520; Glimmer calls start at 16505)

Switzer_gp25
(Original GeneMark call @bp 18997)

Switzer_gp26
(Original GeneMark call @bp 21051)

Switzer_gp27
(Original GeneMark call @bp 21233)

Switzer_gp28
(Original GeneMark call @bp 23073)

Switzer_gp29
(Original GeneMark call @bp 23531)

Switzer_gp30
(Original GeneMark call @bp 23860)

Switzer_gp31
(Original GeneMark call @bp 24232)

Switzer_gp32
(Original GeneMark call @bp 26141; Glimmer calls start at 26078)

Switzer_gp33
(Original GeneMark call @bp 27649)

Switzer_gp34
(Original GeneMark call @bp 27979)

Switzer_gp35
(Original GeneMark call @bp 28167)

Switzer_gp36
(Original GeneMark call @bp 29091)

Switzer_gp37
(Original GeneMark call @bp 29527; Glimmer calls start at 29446)

Switzer_gp38
(Original GeneMark call @bp 31424)

Switzer_gp39
(Original GeneMark call @bp 31591)

Switzer_gp40
(Original GeneMark call @bp 31683 ** not called by Glimmer)

Switzer_gp41
(Original GeneMark call @bp 31952)

Switzer_gp42
(Original GeneMark call @bp 32200; Glimmer calls start at 32077)

Switzer_gp43
(Original GeneMark call @bp 32595)

Switzer_gp44
(Original GeneMark call @bp 34442)

Switzer_gp45
(Original GeneMark call @bp 34719)

Switzer_gp46
(Original GeneMark call @bp 34946)

Switzer_gp47
(Original GeneMark call @bp 35468)

Switzer_gp48
(Original GeneMark call @bp 35835)

Switzer_gp49
(Original GeneMark call @bp 36014)

Switzer_gp50
(Original GeneMark call @bp 36802)

Switzer_gp51
(Original GeneMark call @bp 36929; Glimmer calls start at 36935)

Switzer_gp52
(Original GeneMark call @bp 38598; Glimmer calls start at 38658)

Switzer_gp53
(Original GeneMark call @bp 38834)

Switzer_gp54
(Original GeneMark call @bp 39397)

Switzer_gp55
(Original GeneMark call @bp 40917)

Switzer_gp56
(Original GeneMark call @bp 41349)

Switzer_gp57
(Original GeneMark call @bp 41525)

Switzer_gp58
(Original GeneMark call @bp 41665)

Switzer_gp59
(Original GeneMark call @bp 42152)

Switzer_gp60
(Original GeneMark call @bp 42225 ** not called by Glimmer)

Switzer_gp61
(Original GeneMark call @bp 42383)

Switzer_gp62
(Original GeneMark call @bp 42678)

Switzer_gp63
(Original GeneMark call @bp 43636)

Switzer_gp64
(Original GeneMark call @bp 43809)

Switzer_gp65
(Original GeneMark call @bp 43913; Glimmer calls start at 43928)

Switzer_gp66
(Original GeneMark call @bp 44218)

Switzer_gp67
(Original GeneMark call @bp 44404)

Switzer_gp68
(Original GeneMark call @bp 45249)

Switzer_gp69
(Original GeneMark call @bp 45379)

Switzer_gp70
(Original GeneMark call @bp 45483; Glimmer calls start at 45528)

Switzer_gp71
(Original GeneMark call @bp 45688)

Switzer_gp72
(Original GeneMark call @bp 46080)

Switzer_gp73
(Original GeneMark call @bp 46634)

Switzer_gp75
(Original GeneMark call @bp 47195)

Switzer_gp76
(Original GeneMark call @bp 47461; Glimmer calls start at 47359)

Switzer_gp77
(Original GeneMark call @bp 47661)

Switzer_gp78
(Original GeneMark call @bp 47846)

Switzer_gp79
(Original GeneMark call @bp 48013)

Switzer_gp80
(Original GeneMark call @bp 48135)

Switzer_gp81
(Original GeneMark call @bp 48302)

Switzer_gp82
(Original GeneMark call @bp 48482; Glimmer calls start at 48470)

Switzer_gp83
(Original GeneMark call @bp 48784)

Switzer_gp84
(Original GeneMark call @bp 49767)

Switzer_gp85
(Original GeneMark call @bp 50056; Glimmer calls start at 49927)

Switzer_gp86
(Original GeneMark call @bp 50392)

Switzer_gp87
(Original GeneMark call @bp 50760)

Switzer_gp88
(Original GeneMark call @bp 51095)

Switzer_gp89
(Original GeneMark call @bp 51199 ** not called by Glimmer)

Switzer_gp90
(Original GeneMark call @bp 51546 ** not called by Glimmer)

Switzer_gp91
(Original GeneMark call @bp 51905; Glimmer calls start at 51956)

Number of Genes 91
Number of tRNAs 0
Number of tmRNAs 0
Is live and searchable in GenBank? Yes: JF937108
Available Multimedia
Virtual Digest Picture Download
EM Picture Download
Archiving Info
Pitt Lysate Inventory Numbers 0280, 0281, 0460