Timshel
Locally BLAST this genome
| Detailed Information for Phage Timshel |
| Discovery Information |
| Found by |
Erin Harvey |
| Found in |
Denton, TX USA |
| Finding Institution |
University of North Texas |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| GPS Coordinates |
33.191516 N, 97.096788 W Map |
| Discovery Notes |
dry soil*
some rocks and dead grass
outside temp ~95*F
collected August 31, 2010
*local soil tends to be alkaline -- NOT tested |
| Plaque Notes |
Bull's eye plaques
varied sizes, 1-5 mm in diameter
Cloudy plaques
varied sizes, 2-4 mm in diameter
48+ hours to incubate (slow growing) |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Apr 27, 2011 |
| Sequencing Facility |
DHMRI |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
53278 |
| GC Content |
63.1% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGGCGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A7 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
85 |
| Number of tRNAs |
1
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JF957060 |
| Available Multimedia |
| Plaque Picture |
Download |
| Restriction Digest Picture |
Download |
| EM Picture |
Download |
| Archiving Info |
| SEA Designator |
2010UNTDtimshelELH |
