Violet
Locally BLAST this genome
| Detailed Information for Phage Violet |
| Discovery Information |
| Found by |
Julia Froud |
| Found in |
Santa Cruz, CA USA |
| Finding Institution |
University of California, Santa Cruz |
| Year Found |
2010 |
| From enriched soil sample? |
Yes
|
| Program |
SEA Program |
| Discovery Notes |
Unlandscaped soil in garden, depth <1 inch |
| Plaque Notes |
Clear plaques initially 2.5 mm^2, later 1 mm^2 |
| Sequencing Information |
| Sequencing Complete? |
Yes |
| Date Sequencing Completed |
Jan 28, 2011 |
| Sequencing Facility |
VCU |
| Shotgun Sequencing Method |
454 Only |
| Genome length (bp) |
52481 |
| GC Content |
63.8% |
| Character of genome ends |
Defined physical ends
|
| 3' Overhang Length |
10 bp |
| 3' Overhang Sequence |
CGGATGGTAA |
| Fasta file available? |
Yes: Download fasta file |
| Characterization |
| Cluster |
A |
| Other Cluster Members |
|
| Subcluster |
A1 |
| Morphotype |
Siphoviridae |
| Has been Phamerated? |
Yes |
| Has been Annotated? |
Yes |
| Gene List |
|
| Number of Genes |
89 |
| Number of tRNAs |
0
|
| Number of tmRNAs |
0
|
| Is live and searchable in GenBank? |
Yes: JN687951 |
| Available Multimedia |
| Plaque Picture |
Download |
| Restriction Digest Picture |
Download |
| EM Picture |
Download |
| Archiving Info |
| SEA Designator |
2010UCSCvioletJRF |
